Projects per year
Personal profile
Biography
My research interests fall into two main categories: aquatic ecology and systematics, both of which deal largely with algae. The algae are a polyphyletic assemblage that are the primary producers in most aquatic ecosystems. A great group of organisms, they serve as the basis of myriad aquatic ecosystems. Unfortunately, they have received a lot of publicity in the last decade as eutrophication has led to greater numbers of algal blooms, with concurrent deleterious ecosystem level problems.
My lab has undertaken several projects to understand and quantify how algal communities change in response to different environmental parameters. We are currently working to elucidate the role of nutrient loads in influencing the epiphytic algal community. Further, we are working on a collaborative project to examine the role of native riparian vegetation as a method of ameliorating nutrient loads into tributaries of the St. Johns River.
Second, my lab is very interested in cyanobacterial systematics (untangling evolutionary relationships). To that end we have a collected cyanobacterial strains from around the world and employ morphological (cell dimensions, divisions, ultra-structure, folding patterns of the 16-23S ITS regions), ecological and molecular (sequencing of the 16S rDNA gene, ITS regions) data sets to elucidate phylogenetic relationships
Related documents
Education/Academic qualification
Biology, PhD, Ohio State University
… → 2002
Aquatic Ecology, MS, Kent State University: Kent, OH
… → 1998
Biology, BS
… → 1995
Projects
- 2 Finished
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Collaborative Research: RUI: OCE-BO: Biogeochemistry of diurnal vertical migration in microbial mats of Lake Huron's sinkholes.
Casamatta, D. A. (PI)
2/15/21 → 1/31/24
Project: Research project
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Jacksonville Teacher Residency Noyce Program to Prepare Math and Science Secondary Educators for High-Need Urban Schools
Lastrapes, W. G. (PI), Casamatta, D. A. (CoPI), Lee, K. (CoPI), Zoellner, B. P. (CoPI) & Sen, P. (CoPI)
5/1/17 → 4/30/24
Project: Research project
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Algal highlight: What is in a name? Well…
Casamatta, D., Oct 2024, In: Journal of Phycology. 60, 5, p. 1068-1070 3 p.Research output: Contribution to journal › Commentary/debate › peer-review
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Friends and foes: competition experiments reveal growth facilitation and interference between cyanobacteria and diatom strains in microbial mats
Fray, D. D., Casamatta, D. A., Ruppert, R., Martinez Martinez, S., McGovern, C. A., Biddanda, B. A. & Hamsher, S. E., Nov 2024, In: Hydrobiologia. 851, 20, p. 4835-4851 17 p.Research output: Contribution to journal › Article › peer-review
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Metabarcoding reveals unique microbial mat communities and evidence of biogeographic influence in low-oxygen, high-sulfur sinkholes and springs
Fray, D., McGovern, C. A., Casamatta, D. A., Biddanda, B. A. & Hamsher, S. E., Mar 1 2024, In: Ecology and Evolution. 14, 3, p. e11162 e11162.Research output: Contribution to journal › Article › peer-review
Open Access -
Population genomics and morphological data bridge the centuries of cyanobacterial taxonomy along the continuum of Microcoleus species
Skoupý, S., Stanojković, A., Casamatta, D. A., McGovern, C., Martinović, A., Jaskowiec, J., Konderlová, M., Dodoková, V., Mikesková, P., Jahodářová, E., Jungblut, A. D., van Schalkwyk, H. & Dvořák, P., Apr 19 2024, In: iScience. 27, 4, p. 109444 109444.Research output: Contribution to journal › Article › peer-review
Open Access -
The CIMS (Cyanobacterial ITS motif slicer) for molecular systematics
Labrada, N. A., McGovern, C. A., Thomas, A. L., Hurley, A. C., Mooney, M. R. & Casamatta, D. A., Mar 27 2024, In: Fottea. 24, 1, p. 23-26 4 p.Research output: Contribution to journal › Article › peer-review
Open Access
Datasets
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Cyanobacterial and diatom samples collecteced between April and September 2022, and sequenced for metabarcodig of 16S and rbcL.
Hamsher, S. (Creator), Casamatta, D. (Creator), Biddanda, B. (Creator), Fray, D. (Contributor) & McGovern, C. (Contributor), Oct 19 2023
DOI: 10.26008/1912/bco-dmo.911441.1, https://hdl.handle.net/1912/67033
Dataset
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FIGURE 3. D1-D1 in Descriptions of Brasilonema geniculatum and Calothrix dumus (Nostocales, Cyanobacteria): two new taxa isolated from cemetery tombstones
Dvořák, P. (Contributor), Norwich, A. R. (Contributor), Poulíčková, A. G. (Contributor), Garvey, A. D. (Contributor), Hašler, P. (Contributor), Casamatta, D. A. (Contributor) & Villanueva, C. D. (Contributor), ZENODO, Jan 4 2019
DOI: 10.5281/zenodo.13725559, https://zenodo.org/records/13725559
Dataset
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Metabarcoding data processing using dada2 - rbcL
Fray, D. (Creator), McGovern, C. (Creator), Casamatta, D. (Creator) & Hamsher, S. (Creator), ZENODO, Oct 19 2023
DOI: 10.5281/zenodo.10019983, https://zenodo.org/records/10019983
Dataset
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Cyanobacteria cultures used to generate DNA reference library from samples collected from sites in Alpena and Monroe, Michigan and Palm Coast, Florida between May and June 2022.
Casamatta, D. (Creator), Hamsher, S. (Creator), Biddanda, B. (Creator), Fray, D. (Contributor) & McGovern, C. (Contributor), Oct 17 2023
DOI: 10.26008/1912/bco-dmo.911338.1, https://hdl.handle.net/1912/67028
Dataset
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FIGURE 9 in Descriptions of Brasilonema geniculatum and Calothrix dumus (Nostocales, Cyanobacteria): two new taxa isolated from cemetery tombstones
Casamatta, D. A. (Contributor), Poulíčková, A. G. (Contributor), Garvey, A. D. (Contributor), Villanueva, C. D. (Contributor), Hašler, P. (Contributor), Dvořák, P. (Contributor) & Norwich, A. R. (Contributor), ZENODO, Jan 4 2019
DOI: 10.5281/zenodo.13725571, https://zenodo.org/records/13725571
Dataset