Projects per year
Personal profile
Biography
Dr. Stuart J. Chalk is a Professor in the Department of Chemistry at the University of North Florida. Although trained as an analytical chemist, Dr. Chalk’s research now focuses on the areas of Chemical Informatics and Data Science. In particular, Dr. Chalk has projects focused on machine accessibility of solubility, online enhancements to the IUPAC Gold Book, automated extraction and annotation of chemical property data from PDF files, and scientific data models.
Dr. Chalk received an NSF funded grant in 2019 focusing on semantic integration of heterogeneous datasets from toxicology, medicine, materials, biodiversity, and chemistry. His latest project, “KnowLedger” a digital research notebook, was funded by the National Institute of Standards and Technology (NIST) in June 2021.
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EAGER: CI PAOS: KnowLedger: An Open Digital Research Notebook for Research Data Management
Chalk, S. J. (PI)
1/1/25 → 12/31/26
Project: Research project
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RUI: Framework: Data - An Open Semantic Data Framework for Data-Driven Discovery
Chalk, S. J. (PI)
1/1/19 → 12/31/23
Project: Research project
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Biological research and self-driving labs in deep space supported by artificial intelligence
Sanders, L. M., Scott, R. T., Yang, J. H., Qutub, A. A., Garcia Martin, H., Berrios, D. C., Hastings, J. J. A., Rask, J., Mackintosh, G., Hoarfrost, A. L., Chalk, S., Kalantari, J., Khezeli, K., Antonsen, E. L., Babdor, J., Barker, R., Baranzini, S. E., Beheshti, A., Delgado-Aparicio, G. M. & Glicksberg, B. S. & 36 others, , Mar 2023, In: Nature Machine Intelligence. 5, 3, p. 208-219 12 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Biomonitoring and precision health in deep space supported by artificial intelligence
Scott, R. T., Sanders, L. M., Antonsen, E. L., Hastings, J. J. A., Park, S. M., Mackintosh, G., Reynolds, R. J., Hoarfrost, A. L., Sawyer, A., Greene, C. S., Glicksberg, B. S., Theriot, C. A., Berrios, D. C., Miller, J., Babdor, J., Barker, R., Baranzini, S. E., Beheshti, A., Chalk, S. & Delgado-Aparicio, G. M. & 36 others, , Mar 2023, In: Nature Machine Intelligence. 5, 3, p. 196-207 12 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
Chemical data evaluation: General considerations and approaches for IUPAC projects and the chemistry community (IUPAC Technical Report)
Shaw, D. G., Bruno, I., Chalk, S., Hefter, G., Hibbert, D. B., Hutchinson, R. A., Magalhães, M. C. F., Magee, J., McEwen, L. R., Rumble, J., Russell, G. T., Waghorne, E., Walczyk, T. & Wallington, T. J., Oct 1 2023, In: Pure and Applied Chemistry. 95, 10, p. 1107-1120 14 p.Research output: Contribution to journal › Article › peer-review
Open Access -
CAS Common Chemistry in 2021: Expanding Access to Trusted Chemical Information for the Scientific Community
Jacobs, A., Williams, D., Hickey, K., Patrick, N., Williams, A. J., Chalk, S., Mcewen, L., Willighagen, E., Walker, M., Bolton, E., Sinclair, G. & Sanford, A., Jun 13 2022, In: Journal of Chemical Information and Modeling. 62, 11, p. 2737-2743 7 p.Research output: Contribution to journal › Review article › peer-review
Open Access -
IUPAC specification for the FAIR management of spectroscopic data in chemistry (IUPAC FAIRSpec) - guiding principles
Hanson, R. M., Jeannerat, D., Archibald, M., Bruno, I. J., Chalk, S. J., Davies, A. N., Lancashire, R. J., Lang, J. & Rzepa, H. S., Jun 1 2022, In: Pure and Applied Chemistry. 94, 6, p. 623-636 14 p.Research output: Contribution to journal › Article › peer-review
Open Access
Datasets
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Digital recipes for managing chemical data (Cookbook)
Chalk, S. (Contributor), ZENODO, Apr 5 2023
DOI: 10.5281/zenodo.7803867, https://zenodo.org/records/7803867
Dataset
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FAIRChemistry_ Webinar 01_"What is a chemical? Handling Chemical Data Across Disciplines"
Chalk, S. (Contributor), Bruno, I. (Contributor), McEwen, L. (Contributor) & Mustafa, F. (Contributor), ZENODO, Oct 27 2022
DOI: 10.5281/zenodo.7259102, https://zenodo.org/record/7259102
Dataset
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Provenance in Chemistry
Chalk, S. (Contributor), ZENODO, Jun 24 2021
DOI: 10.5281/zenodo.5027000, https://zenodo.org/record/5027000
Dataset
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chalklab/Dataset-NIST-TRC-MySQL: Release v1.1.1
Chalk, S. (Creator), ZENODO, May 10 2023
DOI: 10.5281/zenodo.7922490, https://zenodo.org/record/7922490
Dataset
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ChalkLab/Dataset-NIST-TRC-MySQL: Initial Release
Chalk, S. (Creator), ZENODO, Dec 21 2022
DOI: 10.5281/zenodo.7468019, https://zenodo.org/record/7468019
Dataset